Right-lateral transform motion associated with the Pacific-North American plate boundary in the modern-day San Francisco Bay Area occurs across a series of sub-parallel fault zones. Much of this motion is accommodated east of the San Andreas Fault by the faults of the East Bay fault system. A major tool for reconstructing the spatial and temporal history of fault motion is the correlation of offset Neogene volcanic rocks. These Neogene volcanics within the California Coast Ranges formed in association with the slab gap that grew as the Mendocino Triple Junction migrated northward. Some of the volcanic centres have been variably offset by subsequent strike-slip faulting. A felsic volcanic unit exposed in Berkeley, CA, known as the Northbrae rhyolite has variably been interpreted to be one of these Neogene volcanic units or to be a Mesozoic volcanic unit associated with the Coast Range ophiolite. A new U-Pb zircon date of 11.10 (Formula presented.) 0.09 Ma confirms the Neogene volcanic interpretation. This date is indistinguishable from previously published Ar/Ar dates from the Burdell Mountain volcanics of the North Bay region as well as a new U-Pb zircon date of 11.07 (Formula presented.) 0.10 Ma. In addition to the indistinguishable ages, similarities in bulk lithology, zircon crystallization/dissolution textures, and zircon trace element geochemistry are consistent with these rhyolites being associated with the same volcanic centre. This correlation implies that 40 (Formula presented.) 5 km of right-lateral offset occurred to the west of the modern-day position of the Hayward-Rodgers Creek fault zone. This offset represents (Formula presented.) 20% of the total offset along the East Bay fault system. A proto-Hayward Fault with a different geometry than that of the present-day played a significant role in the evolution of the fault system. This result highlights the dynamic spatiotemporal variability of strike-slip faults along transform margins.

Mollusk shells protect the animals that form and inhabit them. They are composites of minerals and organics, with diverse mesostructures, including nacre, prismatic calcite, crossed-lamellar aragonite, and foliated calcite. Twins, that is, crystals mirror symmetric with respect to their coherent interface, occurring as formation or deformation twins, are observed in all mollusk shell mesostructures but never within calcite prisms. Here, nanotwins and microwins within single calcite prisms are observed in different shells. Using Polarization-dependent Imaging Contrast (PIC) mapping with 20–60 nm resolution, twins are observed to be 0.2–3 µm thick layers of differently oriented and colored crystals with respect to the main prism crystal. Multiple twins are interspersed with the prism crystal, parallel to one another, and similarly oriented. When comparing images of calcite prisms and twins obtained by PIC mapping and by Electron Back-Scattered Diffraction (EBSD), the images correspond precisely. All twins are e-twin types, with 127° angular distance between c-axes. E-twins are the most common deformation twins in geologic calcite, as also observed here in Carrara marble. Location of all twins near the outer surface of all shells and e-twin type both suggest that twins within calcite prisms in mollusk shells result from deformation twinning.

Developmental abnormalities in otoliths can impact growth and survival in teleost fishes. Here, we quantified the frequency and severity of developmental anomalies in otoliths of delta smelt (Hypomesus transpacificus), a critically endangered estuarine fish that is endemic to the San Francisco Estuary. Left-right asymmetry and anomalous crystalline polymorphs (i.e., vaterite) were quantified and compared between wild and cultured populations using digital image analysis. Visual estimates of vaterite were validated using X-ray diffraction, Raman spectroscopy, laser ablation ICPMS, and electron probe microanalysis. Results indicated that cultured delta smelt were 80 times more likely to contain a vateritic otolith and 18 times more likely to contain relatively large (≥ 15%) amounts of vaterite. Similarly, cultured fish exhibited 30% greater asymmetry than wild fish. These results indicate that cultured delta smelt exhibit a significantly higher frequency of vestibular abnormalities which are known to reduce fitness and survival. Such hatchery effects on otolith development could have important implications for captive culture practices and the supplementation of wild fish populations with cultured individuals.