- Liu, Gang;
- Mukherjee, Bhramar;
- Lee, Seunggeun;
- Lee, Alice W;
- Wu, Anna H;
- Bandera, Elisa V;
- Jensen, Allan;
- Rossing, Mary Anne;
- Moysich, Kirsten B;
- Chang-Claude, Jenny;
- Doherty, Jennifer A;
- Gentry-Maharaj, Aleksandra;
- Kiemeney, Lambertus;
- Gayther, Simon A;
- Modugno, Francesmary;
- Massuger, Leon;
- Goode, Ellen L;
- Fridley, Brooke L;
- Terry, Kathryn L;
- Cramer, Daniel W;
- Ramus, Susan J;
- Anton-Culver, Hoda;
- Ziogas, Argyrios;
- Tyrer, Jonathan P;
- Schildkraut, Joellen M;
- Kjaer, Susanne K;
- Webb, Penelope M;
- Ness, Roberta B;
- Menon, Usha;
- Berchuck, Andrew;
- Pharoah, Paul D;
- Risch, Harvey;
- Pearce, Celeste Leigh;
- Consortium, for the Ovarian Cancer Association
There have been recent proposals advocating the use of additive gene-environment interaction instead of the widely used multiplicative scale, as a more relevant public health measure. Using gene-environment independence enhances statistical power for testing multiplicative interaction in case-control studies. However, under departure from this assumption, substantial bias in the estimates and inflated type I error in the corresponding tests can occur. In this paper, we extend the empirical Bayes (EB) approach previously developed for multiplicative interaction, which trades off between bias and efficiency in a data-adaptive way, to the additive scale. An EB estimator of the relative excess risk due to interaction is derived, and the corresponding Wald test is proposed with a general regression setting under a retrospective likelihood framework. We study the impact of gene-environment association on the resultant test with case-control data. Our simulation studies suggest that the EB approach uses the gene-environment independence assumption in a data-adaptive way and provides a gain in power compared with the standard logistic regression analysis and better control of type I error when compared with the analysis assuming gene-environment independence. We illustrate the methods with data from the Ovarian Cancer Association Consortium.