Recent Work
Parent: Microbiology and Plant Pathology
eScholarship stats: History by Item for October, 2024 through January, 2025
| Item | Title | Total requests | 2025-01 | 2024-12 | 2024-11 | 2024-10 |
|---|---|---|---|---|---|---|
| 71p5t489 | Shed Light in the DaRk LineagES of the Fungal Tree of Life—STRES | 266 | 104 | 121 | 8 | 33 |
| 2cp1n2cg | Toward a Fully Resolved Fungal Tree of Life | 162 | 46 | 43 | 27 | 46 |
| 4485m01m | The Fungal Tree of Life: from Molecular Systematics to Genome-Scale Phylogenies | 153 | 36 | 26 | 39 | 52 |
| 68s498n4 | Small RNA-based antimicrobial immunity | 97 | 29 | 25 | 16 | 27 |
| 5xh5w25b | Survey of Early-Diverging Lineages of Fungi Reveals Abundant and Diverse Mycoviruses | 89 | 27 | 18 | 19 | 25 |
| 5059b0gm | Efficient CRISPR/Cas9-mediated genome modification of the glassy-winged sharpshooter Homalodisca vitripennis (Germar) | 88 | 26 | 18 | 19 | 25 |
| 0xz2n8zv | The genome of Geosiphon pyriformis reveals ancestral traits linked to the emergence of the arbuscular mycorrhizal symbiosis | 83 | 21 | 21 | 16 | 25 |
| 0s0381bd | Comparative genomics reveals dynamic genome evolution in host specialist ectomycorrhizal fungi | 79 | 18 | 21 | 21 | 19 |
| 3377b09t | DNA Geminivirus Infection Induces an Imprinted E3 Ligase Gene to Epigenetically Activate Viral Gene Transcription. | 75 | 23 | 18 | 13 | 21 |
| 44q9j286 | Genome-scale phylogenetic analyses confirm Olpidium as the closest living zoosporic fungus to the non-flagellated, terrestrial fungi | 72 | 22 | 14 | 12 | 24 |
| 2mv8b6ft | Symposium: What Does the Microbiome Tell Us about Prevention and Treatment of AD/ADRD? | 71 | 20 | 11 | 9 | 31 |
| 5pv0g71t | Transcriptional Analysis of Coccidioides immitis Mycelia and Spherules by RNA Sequencing | 71 | 16 | 17 | 13 | 25 |
| 8731v0t7 | Antiviral RNA Silencing in Mammals: No News Is Not Good News | 69 | 22 | 15 | 14 | 18 |
| 6x297461 | A global metagenomic map of urban microbiomes and antimicrobial resistance | 65 | 19 | 11 | 13 | 22 |
| 90k2q84m | Pan-cancer analyses reveal cancer-type-specific fungal ecologies and bacteriome interactions | 59 | 16 | 20 | 8 | 15 |
| 98r4f90g | Cotton plants export microRNAs to inhibit virulence gene expression in a fungal pathogen | 58 | 20 | 17 | 9 | 12 |
| 2b3817x3 | Fungal Morphogenesis, from the Polarized Growth of Hyphae to Complex Reproduction and Infection Structures | 57 | 12 | 8 | 19 | 18 |
| 75q42017 | FungiDB: an integrated functional genomics database for fungi | 51 | 10 | 21 | 4 | 16 |
| 86f967px | Class-wide genomic tendency throughout specific extremes in black fungi | 48 | 3 | 25 | 9 | 11 |
| 61k6n75t | Understudied, underrepresented, and unknown: Methodological biases that limit detection of early diverging fungi from environmental samples | 43 | 11 | 8 | 8 | 16 |
| 1z2724ft | Sequencing the Genomes of the First Terrestrial Fungal Lineages: What Have We Learned? | 42 | 6 | 8 | 9 | 19 |
| 3fm155t1 | Contributions of North American endophytes to the phylogeny, ecology, and taxonomy of Xylariaceae (Sordariomycetes, Ascomycota) | 41 | 13 | 15 | 5 | 8 |
| 5ps719v0 | Widespread adenine N6-methylation of active genes in fungi | 38 | 20 | 6 | 4 | 8 |
| 38d0x4hb | Mycoparasites, Gut Dwellers, and Saprotrophs: Phylogenomic Reconstructions and Comparative Analyses of Kickxellomycotina Fungi | 37 | 9 | 8 | 15 | 5 |
| 45d1k89k | RNAseq and targeted metabolomics implicate RIC8 in regulation of energy homeostasis, amino acid compartmentation, and asexual development in Neurospora crassa. | 37 | 13 | 24 | ||
| 39k4t8cq | Acetaminophen detoxification in cucumber plants via induction of glutathione S-transferases. | 36 | 10 | 9 | 6 | 11 |
| 7vh3f3p0 | The Interface of Vibrio cholerae and the Gut Microbiome | 36 | 9 | 10 | 9 | 8 |
| 9jf550w0 | An Immunocompetent Mouse Model of Zika Virus Infection. | 36 | 10 | 19 | 2 | 5 |
| 0f82g52x | Draft genome sequences for Neonectria magnoliae and Neonectria punicea, canker pathogens of Liriodendron tulipifera and Acer saccharum in West Virginia | 35 | 35 | |||
| 4ms72153 | Effects of experimental nitrogen deposition on soil organic carbon storage in Southern California drylands | 35 | 9 | 12 | 3 | 11 |
| 9sv9z1hp | Virology—the path forward | 35 | 10 | 4 | 5 | 16 |
| 63q8c7ms | The genome of Geosiphon pyriformis reveals ancestral traits linked to the emergence of the arbuscular mycorrhizal symbiosis | 34 | 13 | 8 | 6 | 7 |
| 1s00s56v | Chromosomal-level assembly of Bactericera cockerelli reveals rampant gene family expansions impacting genome structure, function and insect-microbe-plant-interactions. | 33 | 4 | 11 | 3 | 15 |
| 5cm7f9qg | Bifiguratus adelaidae, gen. et sp. nov., a new member of Mucoromycotina in endophytic and soil-dwelling habitats | 32 | 10 | 8 | 8 | 6 |
| 2gr101xp | Phylogenomics of Endogonaceae and evolution of mycorrhizas within Mucoromycota | 31 | 6 | 9 | 3 | 13 |
| 7tk1x1nr | Phylogenomic Analysis of a 55.1-kb 19-Gene Dataset Resolves a Monophyletic Fusarium that Includes the Fusarium solani Species Complex. | 31 | 12 | 2 | 6 | 11 |
| 2222d556 | Discovery of Two Chrysosporium Species with Keratinolytic Activity from Field Soil in Korea. | 30 | 8 | 3 | 19 | |
| 3ds4158z | Determinants of raffinose family oligosaccharide use in Bacteroides species. | 30 | 7 | 4 | 19 | |
| 26k1k7m1 | Rapid Loss of Nutritional Symbionts in an Endemic Hawaiian Herbivore Radiation Is Associated with Plant Galling Habit | 29 | 10 | 6 | 13 | |
| 38c7b26k | Pharmaceutical and personal care products-induced stress symptoms and detoxification mechanisms in cucumber plants. | 29 | 6 | 9 | 4 | 10 |
| 2r78m90g | Evolutionary histories of soil fungi are reflected in their large-scale biogeography | 28 | 5 | 13 | 5 | 5 |
| 4475v7sz | BioClay™ prolongs RNA interference-mediated crop protection against Botrytis cinerea. | 28 | 2 | 9 | 6 | 11 |
| 7503n0k8 | Environmental filtering by pH and soil nutrients drives community assembly in fungi at fine spatial scales | 28 | 7 | 11 | 4 | 6 |
| 25k8j699 | Resolving the Mortierellaceae phylogeny through synthesis of multi-gene phylogenetics and phylogenomics | 27 | 11 | 3 | 6 | 7 |
| 3nk0f08z | Meta-analysis reveals ammonia-oxidizing bacteria respond more strongly to nitrogen addition than ammonia-oxidizing archaea | 27 | 8 | 4 | 4 | 11 |
| 3qx856pd | Herptile gut microbiomes: a natural system to study multi-kingdom interactions between filamentous fungi and bacteria | 27 | 5 | 7 | 10 | 5 |
| 8v83t6ng | Extremophilic and extremotolerant fungi | 27 | 6 | 8 | 4 | 9 |
| 9xg1p31w | Immunoglobulin A coating identifies colitogenic bacteria in inflammatory bowel disease. | 27 | 9 | 2 | 2 | 14 |
| 6b5442r3 | Tracing histoplasmosis genomic epidemiology and species occurrence across the USA. | 26 | 4 | 4 | 5 | 13 |
| 76h9307w | Lessons from the Genome Sequence of Neurospora crassa: Tracing the Path from Genomic Blueprint to Multicellular Organism | 26 | 5 | 8 | 6 | 7 |
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