BioSciences

Parent: Lawrence Berkeley National Laboratory

eScholarship stats: Breakdown by Item for September through December, 2024

Item	Title	Total requests	Download	View-only	%Dnld
1h3515gn	BBMap: A Fast, Accurate, Splice-Aware Aligner	617	82	535	13.3%
22k9d6k9	Phytozome Comparative Plant Genomics Portal	459	9	450	2.0%
9v80x6j2	Reduction of microbial diversity in grassland soil is driven by long-term climate warming	343	295	48	86.0%
57f5059w	Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly	337	100	237	29.7%
1xt5762k	Improving photosynthesis and crop productivity by accelerating recovery from photoprotection	291	167	124	57.4%
7956s6h6	The Human Phenotype Ontology in 2024: phenotypes around the world	209	103	106	49.3%
71p5t489	Shed Light in the DaRk LineagES of the Fungal Tree of Life—STRES	191	183	8	95.8%
25s902m0	Microbial production of advanced biofuels	188	150	38	79.8%
5n75t404	Pre-metastatic niches: organ-specific homes for metastases	147	48	99	32.7%
9d4221mc	De novo DNA synthesis using polymerase-nucleotide conjugates	140	78	62	55.7%
1zx113n5	CTCF-dependent insulation of Hoxb13 and the heterochronic control of tail length.	129	1	128	0.8%
8rk2x6pj	A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome	128	115	13	89.8%
7n8428f3	Genome resources for three modern cotton lines guide future breeding efforts.	127	3	124	2.4%
4zh090xt	Uncovering Earth’s virome	124	61	63	49.2%
6r99w1b4	Complete biosynthesis of cannabinoids and their unnatural analogues in yeast	118	87	31	73.7%
2ct9j9m4	Real-time bioelectronic sensing of environmental contaminants	117	95	22	81.2%
0qq0q564	Genomic Features and Pervasive Negative Selection in Rhodanobacter Strains Isolated from Nitrate and Heavy Metal Contaminated Aquifer	116	2	114	1.7%
0r48g3rc	Cultivation of novel Atribacterota from oil well provides new insight into their diversity, ecology, and evolution in anoxic, carbon-rich environments	116	11	105	9.5%
9033s7sx	Novel bacterial clade reveals origin of form I Rubisco	114	19	95	16.7%
7kt417cw	Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil	113	0	113	0.0%
4p25j4tm	Transcriptomics reveal a mechanism of niche defense: two beneficial root endophytes deploy an antimicrobial GH18‐CBM5 chitinase to protect their hosts	111	51	60	45.9%
3x71c44w	The network makeup artist (NORMA-2.0): distinguishing annotated groups in a network using innovative layout strategies.	107	2	105	1.9%
8cw2z936	UniProt-Related Documents (UniReD): assisting wet lab biologists in their quest on finding novel counterparts in a protein network.	107	2	105	1.9%
1fx8882v	Methods for obtaining and analyzing whole chloroplast genome sequences	106	6	100	5.7%
1hg5v2pg	Metagenomics: DNA sequencing of environmental samples	103	41	62	39.8%
2ms9t9qn	The sequence and analysis of duplication rich human chromosome 16	102	11	91	10.8%
53j5t3m7	Phage therapy: From biological mechanisms to future directions	100	86	14	86.0%
44p4p26z	The impact of reducing signal acquisition specifications on neuronal spike sorting	98	7	91	7.1%
6nn6p8db	Spatial co-transcriptomics reveals discrete stages of the arbuscular mycorrhizal symbiosis	98	88	10	89.8%
0kf9t6gn	Giant viruses with an expanded complement of translation system components	96	80	16	83.3%
3z44x6vv	Enhancer redundancy provides phenotypic robustness in mammalian development	96	24	72	25.0%
9pm0x5mh	Machine learning for metabolic engineering: A review	95	62	33	65.3%
2310v0bv	Vision, challenges and opportunities for a Plant Cell Atlas	93	19	74	20.4%
3dc7454j	The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants	93	2	91	2.2%
5gz6v5q3	Global overview and major challenges of host prediction methods for uncultivated phages	92	19	73	20.7%
6p94q2rz	A roadmap for the functional annotation of protein families: a community perspective	92	19	73	20.7%
8xb4w8w1	Diversity in the soil virosphere: to infinity and beyond?	91	15	76	16.5%
0wp465kn	MetaBAT 2: an adaptive binning algorithm for robust and efficient genome reconstruction from metagenome assemblies	90	24	66	26.7%
1z34b690	FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments	90	5	85	5.6%
2x09q87j	Author Correction: Perspectives on ENCODE	90	8	82	8.9%
44v0c3r5	Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution.	90	22	68	24.4%
8690m3jt	Population genomics provides insights into the genetic basis of adaptive evolution in the mushroom-forming fungus Lentinula edodes	90	23	67	25.6%
0nm5z1jj	Capturing the genetic makeup of the active microbiome in situ	89	8	81	9.0%
2fs841cf	Genome-Based Taxonomic Classification of Bacteroidetes	88	6	82	6.8%
4dz8c79z	First Plant Cell Atlas symposium report	88	12	76	13.6%
63h612dp	Sodalis ligni Strain 159R Isolated from an Anaerobic Lignin-Degrading Consortium	88	8	80	9.1%
77f5s184	The flavonoid procyanidin C1 has senotherapeutic activity and increases lifespan in mice	88	6	82	6.8%
1r25188f	Fungal Transcriptomics	87	78	9	89.7%
5139201v	RNA-guided genome engineering: paradigm shift towards transposons	87	15	72	17.2%
6537f8bf	Expanded diversity of microbial groups that shape the dissimilatory sulfur cycle	87	12	75	13.8%

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